Raw no. of sequenced reads | 21,656,040 |
No. of reads after quality control | 17,257,056 |
Total assembly length [bp] | 14,027,954 |
Q20 [%]a | 89.52 |
Proportion of Ns [%] | 0.02 |
GC content [%] | 39.30 |
Mean abundance [k-mers] (min – max)b | 16.17 (3 – 165) |
No. of transcripts | 18,080 |
No. of singleton contigs | 11,514 |
No. of isogroups | 1445 |
No. of unigenes | 16,082 |
Mean no. transcripts per isogroup (min – max) | 2.38 (2 – 5) |
Mean length of transcripts [bp] (min – max) | 775.89 (200 – 5412) |
N50c [bp] | 1084 |
No. of transcripts with BLASTX hitsd | 8289 |
No. of transcripts with GO annotationsd | 7070 |
No. of transcripts with EC/KEGG annotationsd | 2806 |
No. of GO annotated transcripts with tag hitsd, e | 4451 |