From: Sequencing and assembling bear genomes: the bare necessities
Species | Sequencing technology | Size (Gbp) | N50 (bp) | # Scaffolds | Chr (2n) | NCBI Acc. # | References |
---|---|---|---|---|---|---|---|
Giant panda | Illumina; 10X Genomics; Flow-sorted chromosome sequencing | 2.4 | 129,200,000 | 73,513 | 42 | PRJNA588422 | [36] |
Brown bear | PacBio; Illumina | 2.5 | 70,100,000 | 901 | 74 | PRJNA807323 | [23] |
Asiatic black bear | Illumina NovaSeq | 2.4 | 26,800,000 | 24,967 | 74 | PRJNA573607 | [17] |
Andean bear | Illumina; Oxford Nanopore | 2.2 | 21,100,000 | 12,402 | 52 | PRJNA472085 | [18] |
Polar bear | Ilumina HiSeq; Oxford Nanopore | 2.3 | 72,000,000 | 3899 | 74 | PRJNA669153 | Â |
American black bear | PacBio | 2.4 | 13,900,000 | 2212 | 74 | PRJNA319796 | [21] |
Sun bear | N/A | N/A | N/A | N/A | 74 | N/A | Â |
Sloth bear | N/A | N/A | N/A | N/A | 74 | N/A | Â |